Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

Download FIRM

Citation

Transmembrane Receptor Protein Serine/Threonine Kinase Signaling Pathway (GO:0007178) Genes Targeted by hsa-mir-1290 in SRS Ovarian Hendrix Cluster 14 Table contains all genes in the SRS Ovarian Hendrix cluster number 14. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-1290 GO:0007178 1634 DCN decorin [Source:HGNC Symbol;Acc:2705] zzz999 7056 THBD thrombomodulin [Source:HGNC Symbol;Acc:11784] T 11167 FSTL1 follistatin-like 1 [Source:HGNC Symbol;Acc:3972] T Yes 5396 PRRX1 paired related homeobox 1 [Source:HGNC Symbol;Acc:9142] zzz999 7291 TWIST1 twist homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:12428] T 11259 FILIP1L filamin A interacting protein 1-like [Source:HGNC Symbol;Acc:24589] zzz999 29781 NCAPH2 non-SMC condensin II complex, subunit H2 [Source:HGNC Symbol;Acc:25071] zzz999 1909 EDNRA endothelin receptor type A [Source:HGNC Symbol;Acc:3179] zzz999 800 CALD1 caldesmon 1 [Source:HGNC Symbol;Acc:1441] T 5358 PLS3 plastin 3 [Source:HGNC Symbol;Acc:9091] zzz999 2326 FMO1 flavin containing monooxygenase 1 [Source:HGNC Symbol;Acc:3769] zzz999 10670 RRAGA Ras-related GTP binding A [Source:HGNC Symbol;Acc:16963] zzz999 1293 COL6A3 collagen, type VI, alpha 3 [Source:HGNC Symbol;Acc:2213] T 56944 OLFML3 olfactomedin-like 3 [Source:HGNC Symbol;Acc:24956] T 3381 IBSP integrin-binding sialoprotein [Source:HGNC Symbol;Acc:5341] zzz999 1901 S1PR1 sphingosine-1-phosphate receptor 1 [Source:HGNC Symbol;Acc:3165] zzz999 5654 HTRA1 HtrA serine peptidase 1 [Source:HGNC Symbol;Acc:9476] zzz999 Yes 6515 SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 [Source:HGNC Symbol;Acc:11007] zzz999 5159 PDGFRB platelet-derived growth factor receptor, beta polypeptide [Source:HGNC Symbol;Acc:8804] zzz999 3399 ID3 inhibitor of DNA binding 3, dominant negative helix-loop-helix protein [Source:HGNC Symbol;Acc:5362] zzz999 5054 SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 [Source:HGNC Symbol;Acc:8583] T 83468 GLT8D2 glycosyltransferase 8 domain containing 2 [Source:HGNC Symbol;Acc:24890] zzz999 3080 CFHR2 complement factor H-related 2 [Source:HGNC Symbol;Acc:4890] zzz999 9843 HEPH hephaestin [Source:HGNC Symbol;Acc:4866] zzz999 347733 TUBB2B tubulin, beta 2B [Source:HGNC Symbol;Acc:30829] zzz999 2350 FOLR2 folate receptor 2 (fetal) [Source:HGNC Symbol;Acc:3793] zzz999 10924 SMPDL3A sphingomyelin phosphodiesterase, acid-like 3A [Source:HGNC Symbol;Acc:17389] zzz999 50486 G0S2 G0/G1switch 2 [Source:HGNC Symbol;Acc:30229] zzz999 11031 RAB31 RAB31, member RAS oncogene family [Source:HGNC Symbol;Acc:9771] zzz999 7128 TNFAIP3 tumor necrosis factor, alpha-induced protein 3 [Source:HGNC Symbol;Acc:11896] zzz999 54587 MXRA8 matrix-remodelling associated 8 [Source:HGNC Symbol;Acc:7542] T 23022 PALLD palladin, cytoskeletal associated protein [Source:HGNC Symbol;Acc:17068] T 5157 PDGFRL platelet-derived growth factor receptor-like [Source:HGNC Symbol;Acc:8805] zzz999 8404 SPARCL1 SPARC-like 1 (hevin) [Source:HGNC Symbol;Acc:11220] T 54829 ASPN asporin [Source:HGNC Symbol;Acc:14872] T Yes 5176 SERPINF1 serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 [Source:HGNC Symbol;Acc:8824] zzz999 9920 KBTBD11 kelch repeat and BTB (POZ) domain containing 11 [Source:HGNC Symbol;Acc:29104] T 55704 CCDC88A coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:25523] P T 4907 NT5E 5'-nucleotidase, ecto (CD73) [Source:HGNC Symbol;Acc:8021] zzz999 5175 PECAM1 platelet/endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:8823] T 526 ATP6V1B2 ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2 [Source:HGNC Symbol;Acc:854] T 6876 TAGLN transgelin [Source:HGNC Symbol;Acc:11553] zzz999 7057 THBS1 thrombospondin 1 [Source:HGNC Symbol;Acc:11785] zzz999 Yes 1030 CDKN2B cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) [Source:HGNC Symbol;Acc:1788] T Yes 8664 EIF3D eukaryotic translation initiation factor 3, subunit D [Source:HGNC Symbol;Acc:3278] zzz999 22918 CD93 CD93 molecule [Source:HGNC Symbol;Acc:15855] T 165 AEBP1 AE binding protein 1 [Source:HGNC Symbol;Acc:303] zzz999 79652 TMEM204 transmembrane protein 204 [Source:HGNC Symbol;Acc:14158] zzz999 10186 LHFP lipoma HMGIC fusion partner [Source:HGNC Symbol;Acc:6586] zzz999 5270 SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 [Source:HGNC Symbol;Acc:8951] zzz999 7058 THBS2 thrombospondin 2 [Source:HGNC Symbol;Acc:11786] zzz999 284119 PTRF polymerase I and transcript release factor [Source:HGNC Symbol;Acc:9688] T 11117 EMILIN1 elastin microfibril interfacer 1 [Source:HGNC Symbol;Acc:19880] zzz999 2014 EMP3 epithelial membrane protein 3 [Source:HGNC Symbol;Acc:3335] zzz999 4323 MMP14 matrix metallopeptidase 14 (membrane-inserted) [Source:HGNC Symbol;Acc:7160] zzz999 3397 ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein [Source:HGNC Symbol;Acc:5360] zzz999 Yes 84617 TUBB6 tubulin, beta 6 [Source:HGNC Symbol;Acc:20776] zzz999 54974 THG1L tRNA-histidine guanylyltransferase 1-like (S. cerevisiae) [Source:HGNC Symbol;Acc:26053] zzz999 11010 GLIPR1 GLI pathogenesis-related 1 [Source:HGNC Symbol;Acc:17001] P T 27286 SRPX2 sushi-repeat containing protein, X-linked 2 [Source:HGNC Symbol;Acc:30668] zzz999 4035 LRP1 low density lipoprotein receptor-related protein 1 [Source:HGNC Symbol;Acc:6692] zzz999 9865 zzz999 zzz999 zzz999 64236 PDLIM2 PDZ and LIM domain 2 (mystique) [Source:HGNC Symbol;Acc:13992] zzz999 9516 LITAF lipopolysaccharide-induced TNF factor [Source:HGNC Symbol;Acc:16841] zzz999 558 AXL AXL receptor tyrosine kinase [Source:HGNC Symbol;Acc:905] zzz999 10409 BASP1 brain abundant, membrane attached signal protein 1 [Source:HGNC Symbol;Acc:957] zzz999 81606 LBH limb bud and heart development homolog (mouse) [Source:HGNC Symbol;Acc:29532] zzz999 64131 XYLT1 xylosyltransferase I [Source:HGNC Symbol;Acc:15516] T 5138 PDE2A phosphodiesterase 2A, cGMP-stimulated [Source:HGNC Symbol;Acc:8777] zzz999 2669 GEM GTP binding protein overexpressed in skeletal muscle [Source:HGNC Symbol;Acc:4234] zzz999 1306 COL15A1 collagen, type XV, alpha 1 [Source:HGNC Symbol;Acc:2192] zzz999 7857 SCG2 secretogranin II [Source:HGNC Symbol;Acc:10575] zzz999 1009 CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) [Source:HGNC Symbol;Acc:1750] zzz999 4052 LTBP1 latent transforming growth factor beta binding protein 1 [Source:HGNC Symbol;Acc:6714] zzz999 Yes 1039 CDR2 cerebellar degeneration-related protein 2, 62kDa [Source:HGNC Symbol;Acc:1799] T 9945 GFPT2 glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:4242] zzz999 23452 ANGPTL2 angiopoietin-like 2 [Source:HGNC Symbol;Acc:490] T 1805 DPT dermatopontin [Source:HGNC Symbol;Acc:3011] P T 57333 RCN3 reticulocalbin 3, EF-hand calcium binding domain [Source:HGNC Symbol;Acc:21145] zzz999 9242 MSC musculin [Source:HGNC Symbol;Acc:7321] zzz999 4082 MARCKS myristoylated alanine-rich protein kinase C substrate [Source:HGNC Symbol;Acc:6759] P T 8321 FZD1 frizzled homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:4038] zzz999 Yes 9976 CLEC2B C-type lectin domain family 2, member B [Source:HGNC Symbol;Acc:2053] zzz999 1490 CTGF connective tissue growth factor [Source:HGNC Symbol;Acc:2500] zzz999 3487 IGFBP4 insulin-like growth factor binding protein 4 [Source:HGNC Symbol;Acc:5473] zzz999 57099 AVEN apoptosis, caspase activation inhibitor [Source:HGNC Symbol;Acc:13509] zzz999 2200 FBN1 fibrillin 1 [Source:HGNC Symbol;Acc:3603] zzz999 Yes 57125 PLXDC1 plexin domain containing 1 [Source:HGNC Symbol;Acc:20945] T 1601 DAB2 disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila) [Source:HGNC Symbol;Acc:2662] zzz999 6935 ZEB1 zinc finger E-box binding homeobox 1 [Source:HGNC Symbol;Acc:11642] zzz999 Yes 3956 LGALS1 lectin, galactoside-binding, soluble, 1 [Source:HGNC Symbol;Acc:6561] zzz999 57142 RTN4 reticulon 4 [Source:HGNC Symbol;Acc:14085] zzz999 1513 CTSK cathepsin K [Source:HGNC Symbol;Acc:2536] T 58494 JAM2 junctional adhesion molecule 2 [Source:HGNC Symbol;Acc:14686] zzz999 5919 RARRES2 retinoic acid receptor responder (tazarotene induced) 2 [Source:HGNC Symbol;Acc:9868] zzz999 6678 SPARC secreted protein, acidic, cysteine-rich (osteonectin) [Source:HGNC Symbol;Acc:11219] zzz999 10272 FSTL3 follistatin-like 3 (secreted glycoprotein) [Source:HGNC Symbol;Acc:3973] zzz999 Yes 10226 PLIN3 perilipin 3 [Source:HGNC Symbol;Acc:16893] zzz999 9980 DOPEY2 dopey family member 2 [Source:HGNC Symbol;Acc:1291] zzz999 80114 BICC1 bicaudal C homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:19351] zzz999 55194 FAM176B family with sequence similarity 176, member B [Source:HGNC Symbol;Acc:25558] zzz999 1307 COL16A1 collagen, type XVI, alpha 1 [Source:HGNC Symbol;Acc:2193] zzz999 72 ACTG2 actin, gamma 2, smooth muscle, enteric [Source:HGNC Symbol;Acc:145] zzz999 23191 CYFIP1 cytoplasmic FMR1 interacting protein 1 [Source:HGNC Symbol;Acc:13759] T 79586 CHPF chondroitin polymerizing factor [Source:HGNC Symbol;Acc:24291] zzz999 10630 PDPN podoplanin [Source:HGNC Symbol;Acc:29602] T 10417 SPON2 spondin 2, extracellular matrix protein [Source:HGNC Symbol;Acc:11253] zzz999 51334 PRR16 proline rich 16 [Source:HGNC Symbol;Acc:29654] zzz999 6424 SFRP4 secreted frizzled-related protein 4 [Source:HGNC Symbol;Acc:10778] T 7077 TIMP2 TIMP metallopeptidase inhibitor 2 [Source:HGNC Symbol;Acc:11821] zzz999 799 CALCR calcitonin receptor [Source:HGNC Symbol;Acc:1440] T 1404 HAPLN1 hyaluronan and proteoglycan link protein 1 [Source:HGNC Symbol;Acc:2380] P T 7169 TPM2 tropomyosin 2 (beta) [Source:HGNC Symbol;Acc:12011] zzz999 1291 COL6A1 collagen, type VI, alpha 1 [Source:HGNC Symbol;Acc:2211] zzz999 2619 GAS1 growth arrest-specific 1 [Source:HGNC Symbol;Acc:4165] T 663 BNIP2 BCL2/adenovirus E1B 19kDa interacting protein 2 [Source:HGNC Symbol;Acc:1083] zzz999 4330 MN1 meningioma (disrupted in balanced translocation) 1 [Source:HGNC Symbol;Acc:7180] zzz999 3912 LAMB1 laminin, beta 1 [Source:HGNC Symbol;Acc:6486] zzz999 55365 TMEM176A transmembrane protein 176A [Source:HGNC Symbol;Acc:24930] zzz999 3586 IL10 interleukin 10 [Source:HGNC Symbol;Acc:5962] zzz999 6534 SLC6A7 solute carrier family 6 (neurotransmitter transporter, L-proline), member 7 [Source:HGNC Symbol;Acc:11054] zzz999 114897 C1QTNF1 C1q and tumor necrosis factor related protein 1 [Source:HGNC Symbol;Acc:14324] zzz999 6591 SNAI2 snail homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:11094] zzz999 5376 PMP22 peripheral myelin protein 22 [Source:HGNC Symbol;Acc:9118] T 3791 KDR kinase insert domain receptor (a type III receptor tyrosine kinase) [Source:HGNC Symbol;Acc:6307] zzz999 57205 ATP10D ATPase, class V, type 10D [Source:HGNC Symbol;Acc:13549] T 2697 GJA1 gap junction protein, alpha 1, 43kDa [Source:HGNC Symbol;Acc:4274] zzz999 7431 VIM vimentin [Source:HGNC Symbol;Acc:12692] T 43 ACHE acetylcholinesterase [Source:HGNC Symbol;Acc:108] zzz999 1809 DPYSL3 dihydropyrimidinase-like 3 [Source:HGNC Symbol;Acc:3015] T 1292 COL6A2 collagen, type VI, alpha 2 [Source:HGNC Symbol;Acc:2212] zzz999 29940 DSE dermatan sulfate epimerase [Source:HGNC Symbol;Acc:21144] zzz999 4313 MMP2 matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase) [Source:HGNC Symbol;Acc:7166] zzz999 7041 TGFB1I1 transforming growth factor beta 1 induced transcript 1 [Source:HGNC Symbol;Acc:11767] zzz999 Yes 5899 RALB v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein) [Source:HGNC Symbol;Acc:9840] T 865 CBFB core-binding factor, beta subunit [Source:HGNC Symbol;Acc:1539] zzz999 1281 COL3A1 collagen, type III, alpha 1 [Source:HGNC Symbol;Acc:2201] zzz999 Yes 22795 NID2 nidogen 2 (osteonidogen) [Source:HGNC Symbol;Acc:13389] zzz999 3801 KIFC3 kinesin family member C3 [Source:HGNC Symbol;Acc:6326] zzz999 4811 NID1 nidogen 1 [Source:HGNC Symbol;Acc:7821] T 7412 VCAM1 vascular cell adhesion molecule 1 [Source:HGNC Symbol;Acc:12663] zzz999 3459 IFNGR1 interferon gamma receptor 1 [Source:HGNC Symbol;Acc:5439] zzz999 830 CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 [Source:HGNC Symbol;Acc:1490] zzz999 84159 ARID5B AT rich interactive domain 5B (MRF1-like) [Source:HGNC Symbol;Acc:17362] zzz999 3671 ISLR immunoglobulin superfamily containing leucine-rich repeat [Source:HGNC Symbol;Acc:6133] zzz999 389 RHOC ras homolog gene family, member C [Source:HGNC Symbol;Acc:669] zzz999 22822 PHLDA1 pleckstrin homology-like domain, family A, member 1 [Source:HGNC Symbol;Acc:8933] T

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.